Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Gm2451-201ENSMUST00000199447 999 ntBASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Gm10290-201ENSMUST00000200451 999 ntBASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Gm2651-201ENSMUST00000203560 838 ntBASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
H2afb3S4R1G7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb3S4R1G7 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb3S4R1G7 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb3S4R1G7 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb3S4R1G7 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb3S4R1G7 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb3S4R1G7 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb3S4R1G7 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
H2afb3S4R1G7 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb3S4R1G7 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
H2afb3S4R1G7 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb3S4R1G7 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.92□□□□□ -0.34
H2afb3S4R1G7 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
H2afb3S4R1G7 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
H2afb3S4R1G7 Olfr286-202ENSMUST00000205305 969 ntBASIC12.92□□□□□ -0.34
H2afb3S4R1G7 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.92□□□□□ -0.34
H2afb3S4R1G7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
H2afb3S4R1G7 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb3S4R1G7 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
H2afb3S4R1G7 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb3S4R1G7 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb3S4R1G7 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb3S4R1G7 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb3S4R1G7 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb3S4R1G7 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb3S4R1G7 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
H2afb3S4R1G7 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Thap2-203ENSMUST00000218989 527 ntBASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb3S4R1G7 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms