Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Smarcb1Q9Z0H3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcb1Q9Z0H3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcb1Q9Z0H3 Carlr-201ENSMUST00000181515 2574 ntBASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcb1Q9Z0H3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.83□□□□□ -0.03
Smarcb1Q9Z0H3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smarcb1Q9Z0H3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Smarcb1Q9Z0H3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Efs-202ENSMUST00000227037 2540 ntBASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Gm28760-201ENSMUST00000185995 736 ntBASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Gm42612-201ENSMUST00000197986 623 ntBASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Gm43170-201ENSMUST00000199827 612 ntBASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcb1Q9Z0H3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms