Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.15□□□□□ -0.46
Cx3cr1Q9Z0D9 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cx3cr1Q9Z0D9 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Cx3cr1Q9Z0D9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cx3cr1Q9Z0D9 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cx3cr1Q9Z0D9 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm11764-201ENSMUST00000120221 623 ntBASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm33142-201ENSMUST00000193913 867 ntBASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm2451-201ENSMUST00000199447 999 ntBASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm10290-201ENSMUST00000200451 999 ntBASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cx3cr1Q9Z0D9 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm8584-201ENSMUST00000171982 758 ntBASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms