Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tubd1Q9R1K7 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubd1Q9R1K7 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubd1Q9R1K7 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.52□□□□□ -0.08
Tubd1Q9R1K7 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubd1Q9R1K7 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubd1Q9R1K7 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubd1Q9R1K7 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubd1Q9R1K7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubd1Q9R1K7 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.52□□□□□ -0.09
Tubd1Q9R1K7 Gm13223-201ENSMUST00000118609 747 ntBASIC14.52□□□□□ -0.09
Tubd1Q9R1K7 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Tubd1Q9R1K7 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tubd1Q9R1K7 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.52□□□□□ -0.09
Tubd1Q9R1K7 Gm38294-201ENSMUST00000192831 381 ntBASIC14.52□□□□□ -0.09
Tubd1Q9R1K7 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.52□□□□□ -0.09
Tubd1Q9R1K7 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubd1Q9R1K7 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubd1Q9R1K7 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubd1Q9R1K7 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubd1Q9R1K7 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Tubd1Q9R1K7 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubd1Q9R1K7 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubd1Q9R1K7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tubd1Q9R1K7 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubd1Q9R1K7 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubd1Q9R1K7 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubd1Q9R1K7 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Tubd1Q9R1K7 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Gm14767-201ENSMUST00000121559 586 ntBASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Gm9229-201ENSMUST00000222777 126 ntBASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms