Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nubp2Q9R061 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.74□□□□□ -0.37
Nubp2Q9R061 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nubp2Q9R061 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.74□□□□□ -0.37
Nubp2Q9R061 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Gm13365-201ENSMUST00000121188 973 ntBASIC12.74□□□□□ -0.37
Nubp2Q9R061 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.74□□□□□ -0.37
Nubp2Q9R061 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Nubp2Q9R061 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nubp2Q9R061 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Nubp2Q9R061 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.74□□□□□ -0.37
Nubp2Q9R061 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nubp2Q9R061 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nubp2Q9R061 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Gm11745-201ENSMUST00000121669 448 ntBASIC12.73□□□□□ -0.37
Nubp2Q9R061 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.73□□□□□ -0.37
Nubp2Q9R061 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Nubp2Q9R061 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.73□□□□□ -0.37
Nubp2Q9R061 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.73□□□□□ -0.37
Nubp2Q9R061 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nubp2Q9R061 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nubp2Q9R061 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Nubp2Q9R061 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.72□□□□□ -0.37
Nubp2Q9R061 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.72□□□□□ -0.37
Nubp2Q9R061 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nubp2Q9R061 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nubp2Q9R061 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nubp2Q9R061 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nubp2Q9R061 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nubp2Q9R061 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.72□□□□□ -0.37
Nubp2Q9R061 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nubp2Q9R061 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nubp2Q9R061 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nubp2Q9R061 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Nubp2Q9R061 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nubp2Q9R061 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms