Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a4Q9QZR9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a4Q9QZR9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a4Q9QZR9 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a4Q9QZR9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a4Q9QZR9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a4Q9QZR9 Gm14263-201ENSMUST00000117955 746 ntBASIC14.03□□□□□ -0.16
Col4a4Q9QZR9 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.03□□□□□ -0.16
Col4a4Q9QZR9 Gm2445-201ENSMUST00000182798 989 ntBASIC14.03□□□□□ -0.16
Col4a4Q9QZR9 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.03□□□□□ -0.16
Col4a4Q9QZR9 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.03□□□□□ -0.16
Col4a4Q9QZR9 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.03□□□□□ -0.16
Col4a4Q9QZR9 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col4a4Q9QZR9 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a4Q9QZR9 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.03□□□□□ -0.16
Col4a4Q9QZR9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a4Q9QZR9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a4Q9QZR9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a4Q9QZR9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a4Q9QZR9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a4Q9QZR9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Col4a4Q9QZR9 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Gm24830-201ENSMUST00000102024 166 ntBASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Gm11591-201ENSMUST00000120063 702 ntBASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Gm25890-201ENSMUST00000177643 165 ntBASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Gm22614-201ENSMUST00000178300 165 ntBASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Gm22042-201ENSMUST00000082989 165 ntBASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Gm26232-201ENSMUST00000083360 166 ntBASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Gm24136-201ENSMUST00000083374 165 ntBASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Gm26110-201ENSMUST00000083971 165 ntBASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a4Q9QZR9 Prob1-201ENSMUST00000097619 3021 ntBASIC14.02□□□□□ -0.17
Col4a4Q9QZR9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a4Q9QZR9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Col4a4Q9QZR9 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.02□□□□□ -0.17
Col4a4Q9QZR9 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a4Q9QZR9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a4Q9QZR9 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.02□□□□□ -0.17
Col4a4Q9QZR9 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a4Q9QZR9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a4Q9QZR9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Mir6927-201ENSMUST00000184494 71 ntBASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a4Q9QZR9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a4Q9QZR9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms