Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Gm13453-201ENSMUST00000118708 357 ntBASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Gm25925-201ENSMUST00000158314 306 ntBASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Auts2-212ENSMUST00000178555 309 ntBASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Gm10576-201ENSMUST00000191927 825 ntBASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 AA619741-201ENSMUST00000195095 646 ntBASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Gm45453-201ENSMUST00000211758 853 ntBASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssmem1Q9D9Y8 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Gm14767-201ENSMUST00000121559 586 ntBASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Gm27533-201ENSMUST00000183800 152 ntBASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Gm27631-201ENSMUST00000184163 466 ntBASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Gm17837-201ENSMUST00000186435 985 ntBASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ssmem1Q9D9Y8 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Gm15653-201ENSMUST00000119247 907 ntBASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Mir7023-201ENSMUST00000185093 64 ntBASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Gm6888-201ENSMUST00000221983 706 ntBASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms