Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Gm12882-201ENSMUST00000121696 517 ntBASIC12.57□□□□□ -0.4
Tmem54Q9D7S1 Gm27631-201ENSMUST00000184163 466 ntBASIC12.57□□□□□ -0.4
Tmem54Q9D7S1 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.57□□□□□ -0.4
Tmem54Q9D7S1 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tmem54Q9D7S1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tmem54Q9D7S1 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tmem54Q9D7S1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tmem54Q9D7S1 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tmem54Q9D7S1 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tmem54Q9D7S1 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tmem54Q9D7S1 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tmem54Q9D7S1 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tmem54Q9D7S1 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Tmem54Q9D7S1 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tmem54Q9D7S1 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tmem54Q9D7S1 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Tmem54Q9D7S1 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Tmem54Q9D7S1 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Gm45453-201ENSMUST00000211758 853 ntBASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.56□□□□□ -0.4
Tmem54Q9D7S1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Gm27622-201ENSMUST00000183779 60 ntBASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 AA619741-201ENSMUST00000195095 646 ntBASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.55□□□□□ -0.4
Tmem54Q9D7S1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 BC001981-202ENSMUST00000191393 1545 ntBASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms