Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3bl1Q9D701 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.07□□□□□ -0.32
Upk3bl1Q9D701 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3bl1Q9D701 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3bl1Q9D701 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3bl1Q9D701 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3bl1Q9D701 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3bl1Q9D701 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3bl1Q9D701 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.07□□□□□ -0.32
Upk3bl1Q9D701 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3bl1Q9D701 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Gm45328-201ENSMUST00000210942 917 ntBASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Upk3bl1Q9D701 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Gm9726-201ENSMUST00000180321 678 ntBASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Gm7506-201ENSMUST00000207758 815 ntBASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Gm45925-201ENSMUST00000218882 744 ntBASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Gm18032-201ENSMUST00000222541 538 ntBASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bl1Q9D701 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 Gm10013-201ENSMUST00000106074 672 ntBASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 Gm11950-201ENSMUST00000121615 838 ntBASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 Gm8584-201ENSMUST00000171982 758 ntBASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bl1Q9D701 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms