Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.26□□□□□ -0.29
Trim13Q9CYB0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Birc2-201ENSMUST00000054878 378 ntBASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trim13Q9CYB0 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trim13Q9CYB0 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim13Q9CYB0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.25□□□□□ -0.29
Trim13Q9CYB0 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim13Q9CYB0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim13Q9CYB0 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim13Q9CYB0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim13Q9CYB0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim13Q9CYB0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim13Q9CYB0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim13Q9CYB0 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trim13Q9CYB0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim13Q9CYB0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim13Q9CYB0 Gm34391-201ENSMUST00000203706 907 ntBASIC13.25□□□□□ -0.29
Trim13Q9CYB0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.25□□□□□ -0.29
Trim13Q9CYB0 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.25□□□□□ -0.29
Trim13Q9CYB0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim13Q9CYB0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim13Q9CYB0 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.25□□□□□ -0.29
Trim13Q9CYB0 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim13Q9CYB0 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.25□□□□□ -0.29
Trim13Q9CYB0 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim13Q9CYB0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim13Q9CYB0 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim13Q9CYB0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim13Q9CYB0 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim13Q9CYB0 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim13Q9CYB0 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim13Q9CYB0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim13Q9CYB0 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Gm13418-201ENSMUST00000119097 944 ntBASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Gm5682-201ENSMUST00000173402 505 ntBASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trim13Q9CYB0 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms