Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap3bQ9CQE1 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Nipsnap3bQ9CQE1 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm14042-201ENSMUST00000120139 833 ntBASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm5177-201ENSMUST00000183092 997 ntBASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap3bQ9CQE1 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.13□□□□□ -0.15
Nipsnap3bQ9CQE1 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms