Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim33Q99PP7 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim33Q99PP7 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.24□□□□□ -0.13
Trim33Q99PP7 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim33Q99PP7 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Gm12134-201ENSMUST00000122109 520 ntBASIC14.24□□□□□ -0.13
Trim33Q99PP7 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Gm18737-201ENSMUST00000173594 937 ntBASIC14.24□□□□□ -0.13
Trim33Q99PP7 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Carlr-201ENSMUST00000181515 2574 ntBASIC14.24□□□□□ -0.13
Trim33Q99PP7 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim33Q99PP7 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.23□□□□□ -0.13
Trim33Q99PP7 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Gm2810-201ENSMUST00000118681 990 ntBASIC14.23□□□□□ -0.13
Trim33Q99PP7 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Mir6990-201ENSMUST00000183724 91 ntBASIC14.23□□□□□ -0.13
Trim33Q99PP7 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Gm45098-201ENSMUST00000207179 657 ntBASIC14.23□□□□□ -0.13
Trim33Q99PP7 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.23□□□□□ -0.13
Trim33Q99PP7 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim33Q99PP7 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim33Q99PP7 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Gm44335-201ENSMUST00000196879 141 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms