Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smim3Q99PE5 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Gm10013-201ENSMUST00000106074 672 ntBASIC12.22□□□□□ -0.45
Smim3Q99PE5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Gm7506-201ENSMUST00000207758 815 ntBASIC12.22□□□□□ -0.45
Smim3Q99PE5 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Gm45328-201ENSMUST00000210942 917 ntBASIC12.22□□□□□ -0.45
Smim3Q99PE5 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
Smim3Q99PE5 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim3Q99PE5 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smim3Q99PE5 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim3Q99PE5 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim3Q99PE5 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Smim3Q99PE5 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim3Q99PE5 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim3Q99PE5 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Smim3Q99PE5 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim3Q99PE5 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim3Q99PE5 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.21□□□□□ -0.45
Smim3Q99PE5 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim3Q99PE5 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.21□□□□□ -0.45
Smim3Q99PE5 Gm11950-201ENSMUST00000121615 838 ntBASIC12.21□□□□□ -0.45
Smim3Q99PE5 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.21□□□□□ -0.45
Smim3Q99PE5 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.21□□□□□ -0.45
Smim3Q99PE5 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.21□□□□□ -0.45
Smim3Q99PE5 Mir3081-201ENSMUST00000175305 84 ntBASIC12.21□□□□□ -0.45
Smim3Q99PE5 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.21□□□□□ -0.45
Smim3Q99PE5 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.21□□□□□ -0.45
Smim3Q99PE5 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim3Q99PE5 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smim3Q99PE5 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smim3Q99PE5 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.21□□□□□ -0.45
Smim3Q99PE5 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim3Q99PE5 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim3Q99PE5 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim3Q99PE5 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smim3Q99PE5 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smim3Q99PE5 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smim3Q99PE5 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Smim3Q99PE5 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Smim3Q99PE5 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smim3Q99PE5 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smim3Q99PE5 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Smim3Q99PE5 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smim3Q99PE5 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smim3Q99PE5 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smim3Q99PE5 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smim3Q99PE5 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.21□□□□□ -0.46
Smim3Q99PE5 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Smim3Q99PE5 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Smim3Q99PE5 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smim3Q99PE5 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Smim3Q99PE5 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Smim3Q99PE5 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim3Q99PE5 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim3Q99PE5 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smim3Q99PE5 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Smim3Q99PE5 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim3Q99PE5 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim3Q99PE5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smim3Q99PE5 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim3Q99PE5 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smim3Q99PE5 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim3Q99PE5 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim3Q99PE5 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.2□□□□□ -0.46
Smim3Q99PE5 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim3Q99PE5 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim3Q99PE5 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.2□□□□□ -0.46
Smim3Q99PE5 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Smim3Q99PE5 Gm12497-201ENSMUST00000138778 237 ntBASIC12.2□□□□□ -0.46
Smim3Q99PE5 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.2□□□□□ -0.46
Smim3Q99PE5 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Smim3Q99PE5 Gm18032-201ENSMUST00000222541 538 ntBASIC12.2□□□□□ -0.46
Smim3Q99PE5 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim3Q99PE5 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim3Q99PE5 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smim3Q99PE5 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim3Q99PE5 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smim3Q99PE5 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms