Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkd1Q99MH6 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkd1Q99MH6 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkd1Q99MH6 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkd1Q99MH6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd1Q99MH6 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nkd1Q99MH6 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkd1Q99MH6 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkd1Q99MH6 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.52□□□□□ -0.24
Nkd1Q99MH6 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkd1Q99MH6 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkd1Q99MH6 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkd1Q99MH6 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkd1Q99MH6 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkd1Q99MH6 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Nkd1Q99MH6 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
Nkd1Q99MH6 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkd1Q99MH6 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.52□□□□□ -0.25
Nkd1Q99MH6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Gm2451-201ENSMUST00000199447 999 ntBASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Gm10290-201ENSMUST00000200451 999 ntBASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Acot6-202ENSMUST00000222921 3622 ntBASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd1Q99MH6 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Nkd1Q99MH6 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nkd1Q99MH6 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Nkd1Q99MH6 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkd1Q99MH6 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nkd1Q99MH6 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.51□□□□□ -0.25
Nkd1Q99MH6 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkd1Q99MH6 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkd1Q99MH6 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkd1Q99MH6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkd1Q99MH6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkd1Q99MH6 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkd1Q99MH6 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms