Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Mir1247-201ENSMUST00000116706 82 ntBASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Gm27486-201ENSMUST00000184923 80 ntBASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nkx6-1Q99MA9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx6-1Q99MA9 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Nkx6-1Q99MA9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Nkx6-1Q99MA9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Gm45784-201ENSMUST00000188360 142 ntBASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms