Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nck1Q99M51 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nck1Q99M51 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.69□□□□□ -0.22
Nck1Q99M51 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nck1Q99M51 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nck1Q99M51 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nck1Q99M51 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nck1Q99M51 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nck1Q99M51 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nck1Q99M51 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nck1Q99M51 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nck1Q99M51 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nck1Q99M51 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nck1Q99M51 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nck1Q99M51 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nck1Q99M51 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nck1Q99M51 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.69□□□□□ -0.22
Nck1Q99M51 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nck1Q99M51 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.68□□□□□ -0.22
Nck1Q99M51 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Nck1Q99M51 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.68□□□□□ -0.22
Nck1Q99M51 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Nck1Q99M51 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.68□□□□□ -0.22
Nck1Q99M51 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Gm4899-201ENSMUST00000178708 719 ntBASIC13.68□□□□□ -0.22
Nck1Q99M51 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Nck1Q99M51 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Nck1Q99M51 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.68□□□□□ -0.22
Nck1Q99M51 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.68□□□□□ -0.22
Nck1Q99M51 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nck1Q99M51 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nck1Q99M51 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nck1Q99M51 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nck1Q99M51 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Nck1Q99M51 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.67□□□□□ -0.22
Nck1Q99M51 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nck1Q99M51 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nck1Q99M51 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.67□□□□□ -0.22
Nck1Q99M51 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.67□□□□□ -0.22
Nck1Q99M51 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nck1Q99M51 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nck1Q99M51 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nck1Q99M51 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nck1Q99M51 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nck1Q99M51 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nck1Q99M51 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nck1Q99M51 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nck1Q99M51 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nck1Q99M51 Olfr286-202ENSMUST00000205305 969 ntBASIC13.67□□□□□ -0.22
Nck1Q99M51 Gm18669-201ENSMUST00000216049 778 ntBASIC13.67□□□□□ -0.22
Nck1Q99M51 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
Nck1Q99M51 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nck1Q99M51 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nck1Q99M51 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nck1Q99M51 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nck1Q99M51 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nck1Q99M51 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nck1Q99M51 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nck1Q99M51 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nck1Q99M51 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nck1Q99M51 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
Nck1Q99M51 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.66□□□□□ -0.22
Nck1Q99M51 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.66□□□□□ -0.22
Nck1Q99M51 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nck1Q99M51 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nck1Q99M51 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nck1Q99M51 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nck1Q99M51 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nck1Q99M51 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nck1Q99M51 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Nck1Q99M51 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Nck1Q99M51 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.66□□□□□ -0.22
Nck1Q99M51 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.66□□□□□ -0.22
Nck1Q99M51 Gm14042-201ENSMUST00000120139 833 ntBASIC13.66□□□□□ -0.22
Nck1Q99M51 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms