Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Gm15393-201ENSMUST00000120499 219 ntBASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.31□□□□□ -0.12
Cstf1Q99LC2 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Gm13464-201ENSMUST00000119418 935 ntBASIC14.3□□□□□ -0.12
Cstf1Q99LC2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Gm6916-202ENSMUST00000205523 195 ntBASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cstf1Q99LC2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Gm15678-201ENSMUST00000117573 960 ntBASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Gm27839-201ENSMUST00000184242 106 ntBASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.29□□□□□ -0.12
Cstf1Q99LC2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf1Q99LC2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms