Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk9Q99J95 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk9Q99J95 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cdk9Q99J95 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk9Q99J95 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk9Q99J95 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk9Q99J95 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.45□□□□□ -0.1
Cdk9Q99J95 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.45□□□□□ -0.1
Cdk9Q99J95 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.45□□□□□ -0.1
Cdk9Q99J95 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk9Q99J95 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk9Q99J95 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk9Q99J95 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cdk9Q99J95 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cdk9Q99J95 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk9Q99J95 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk9Q99J95 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk9Q99J95 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk9Q99J95 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdk9Q99J95 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk9Q99J95 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk9Q99J95 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk9Q99J95 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk9Q99J95 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.44□□□□□ -0.1
Cdk9Q99J95 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk9Q99J95 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk9Q99J95 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk9Q99J95 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk9Q99J95 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.44□□□□□ -0.1
Cdk9Q99J95 Gm13884-201ENSMUST00000118103 829 ntBASIC14.44□□□□□ -0.1
Cdk9Q99J95 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.44□□□□□ -0.1
Cdk9Q99J95 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk9Q99J95 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk9Q99J95 Gm18489-201ENSMUST00000172565 551 ntBASIC14.44□□□□□ -0.1
Cdk9Q99J95 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.44□□□□□ -0.1
Cdk9Q99J95 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.44□□□□□ -0.1
Cdk9Q99J95 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk9Q99J95 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.44□□□□□ -0.1
Cdk9Q99J95 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk9Q99J95 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk9Q99J95 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.44□□□□□ -0.1
Cdk9Q99J95 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk9Q99J95 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk9Q99J95 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.44□□□□□ -0.1
Cdk9Q99J95 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk9Q99J95 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk9Q99J95 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk9Q99J95 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk9Q99J95 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk9Q99J95 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.43□□□□□ -0.1
Cdk9Q99J95 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.43□□□□□ -0.1
Cdk9Q99J95 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk9Q99J95 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk9Q99J95 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cdk9Q99J95 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.42□□□□□ -0.1
Cdk9Q99J95 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms