Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.88■□□□□ 0.29
Col20a1Q923P0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Col20a1Q923P0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col20a1Q923P0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col20a1Q923P0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col20a1Q923P0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Col20a1Q923P0 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col20a1Q923P0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col20a1Q923P0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Col20a1Q923P0 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col20a1Q923P0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col20a1Q923P0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Col20a1Q923P0 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col20a1Q923P0 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col20a1Q923P0 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col20a1Q923P0 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.87■□□□□ 0.29
Col20a1Q923P0 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col20a1Q923P0 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col20a1Q923P0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col20a1Q923P0 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Col20a1Q923P0 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.87■□□□□ 0.29
Col20a1Q923P0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.87■□□□□ 0.29
Col20a1Q923P0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col20a1Q923P0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Col20a1Q923P0 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col20a1Q923P0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.87■□□□□ 0.29
Col20a1Q923P0 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col20a1Q923P0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.86■□□□□ 0.29
Col20a1Q923P0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.86■□□□□ 0.29
Col20a1Q923P0 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.86■□□□□ 0.29
Col20a1Q923P0 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.86■□□□□ 0.29
Col20a1Q923P0 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.86■□□□□ 0.29
Col20a1Q923P0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Col20a1Q923P0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col20a1Q923P0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.85■□□□□ 0.29
Col20a1Q923P0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col20a1Q923P0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col20a1Q923P0 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col20a1Q923P0 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col20a1Q923P0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col20a1Q923P0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col20a1Q923P0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col20a1Q923P0 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Col20a1Q923P0 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col20a1Q923P0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Col20a1Q923P0 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.85■□□□□ 0.29
Col20a1Q923P0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col20a1Q923P0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col20a1Q923P0 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Col20a1Q923P0 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.85■□□□□ 0.29
Col20a1Q923P0 Gm9794-201ENSMUST00000202370 423 ntBASIC16.85■□□□□ 0.29
Col20a1Q923P0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.85■□□□□ 0.29
Col20a1Q923P0 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.85■□□□□ 0.29
Col20a1Q923P0 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col20a1Q923P0 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Col20a1Q923P0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Col20a1Q923P0 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Col20a1Q923P0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.85■□□□□ 0.29
Col20a1Q923P0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col20a1Q923P0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col20a1Q923P0 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col20a1Q923P0 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.84■□□□□ 0.29
Col20a1Q923P0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col20a1Q923P0 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col20a1Q923P0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col20a1Q923P0 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col20a1Q923P0 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col20a1Q923P0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Col20a1Q923P0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col20a1Q923P0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.84■□□□□ 0.29
Col20a1Q923P0 Gm37714-201ENSMUST00000194742 342 ntBASIC16.84■□□□□ 0.29
Col20a1Q923P0 Gm8515-201ENSMUST00000194852 576 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms