Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sf3b3Q921M3 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Sf3b3Q921M3 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sf3b3Q921M3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sf3b3Q921M3 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sf3b3Q921M3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sf3b3Q921M3 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sf3b3Q921M3 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sf3b3Q921M3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sf3b3Q921M3 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC17.13■□□□□ 0.33
Sf3b3Q921M3 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sf3b3Q921M3 AC125117.1-201ENSMUST00000228121 468 ntBASIC17.13■□□□□ 0.33
Sf3b3Q921M3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sf3b3Q921M3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sf3b3Q921M3 Gm9899-201ENSMUST00000065519 555 ntBASIC17.13■□□□□ 0.33
Sf3b3Q921M3 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Sf3b3Q921M3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC17.13■□□□□ 0.33
Sf3b3Q921M3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Sf3b3Q921M3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.13■□□□□ 0.33
Sf3b3Q921M3 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sf3b3Q921M3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sf3b3Q921M3 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.13■□□□□ 0.33
Sf3b3Q921M3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC17.13■□□□□ 0.33
Sf3b3Q921M3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sf3b3Q921M3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Gm4984-201ENSMUST00000115987 360 ntBASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3b3Q921M3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Gm15429-201ENSMUST00000151268 798 ntBASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Mir1982-201ENSMUST00000157368 74 ntBASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Gm43630-201ENSMUST00000201550 776 ntBASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Gm7287-201ENSMUST00000205267 602 ntBASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Gm44799-201ENSMUST00000207639 1202 ntBASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Mir497b-201ENSMUST00000093601 125 ntBASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3b3Q921M3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sf3b3Q921M3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sf3b3Q921M3 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sf3b3Q921M3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sf3b3Q921M3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.1■□□□□ 0.33
Sf3b3Q921M3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sf3b3Q921M3 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC17.1■□□□□ 0.33
Sf3b3Q921M3 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Sf3b3Q921M3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
Sf3b3Q921M3 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sf3b3Q921M3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms