Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm13616-201ENSMUST00000120600 222 ntBASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 Gm22175-201ENSMUST00000175007 78 ntBASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 Gm27622-201ENSMUST00000183779 60 ntBASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Gm24543-201ENSMUST00000103867 82 ntBASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Gm25144-201ENSMUST00000179561 110 ntBASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Gm25352-201ENSMUST00000179815 110 ntBASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha9Q91Y11 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Gm44608-201ENSMUST00000206827 855 ntBASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Gm16476-201ENSMUST00000221544 139 ntBASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Mir125a-201ENSMUST00000083545 68 ntBASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha9Q91Y11 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha9Q91Y11 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdha9Q91Y11 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha9Q91Y11 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdha9Q91Y11 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha9Q91Y11 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha9Q91Y11 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha9Q91Y11 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha9Q91Y11 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdha9Q91Y11 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha9Q91Y11 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.22■□□□□ 0.03
Pcdha9Q91Y11 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdha9Q91Y11 Dupd1-202ENSMUST00000224735 548 ntBASIC15.22■□□□□ 0.03
Pcdha9Q91Y11 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha9Q91Y11 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha9Q91Y11 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha9Q91Y11 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha9Q91Y11 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha9Q91Y11 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha9Q91Y11 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha9Q91Y11 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha9Q91Y11 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms