Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Gm11779-201ENSMUST00000118541 368 ntBASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Gm13597-201ENSMUST00000121239 375 ntBASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Gm27525-201ENSMUST00000184465 107 ntBASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Gm2272-201ENSMUST00000194903 582 ntBASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac1Q91Y10 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Gm8749-201ENSMUST00000117737 331 ntBASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Gm8000-201ENSMUST00000188378 592 ntBASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac1Q91Y10 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhac1Q91Y10 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhac1Q91Y10 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhac1Q91Y10 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Pcdhac1Q91Y10 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhac1Q91Y10 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhac1Q91Y10 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhac1Q91Y10 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhac1Q91Y10 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhac1Q91Y10 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhac1Q91Y10 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhac1Q91Y10 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdhac1Q91Y10 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhac1Q91Y10 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdhac1Q91Y10 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhac1Q91Y10 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Pcdhac1Q91Y10 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhac1Q91Y10 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Pcdhac1Q91Y10 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms