Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm28678-201ENSMUST00000191593 696 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm20910-201ENSMUST00000193268 696 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm21871-201ENSMUST00000194621 696 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb1Q91Y08 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb1Q91Y08 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb1Q91Y08 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb1Q91Y08 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb1Q91Y08 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb1Q91Y08 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb1Q91Y08 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb1Q91Y08 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb1Q91Y08 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhb1Q91Y08 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb1Q91Y08 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.9□□□□□ -0.02
Pcdhb1Q91Y08 Gm24513-201ENSMUST00000174964 138 ntBASIC14.9□□□□□ -0.02
Pcdhb1Q91Y08 Mir6990-201ENSMUST00000183724 91 ntBASIC14.9□□□□□ -0.02
Pcdhb1Q91Y08 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.9□□□□□ -0.02
Pcdhb1Q91Y08 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhb1Q91Y08 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb1Q91Y08 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb1Q91Y08 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb1Q91Y08 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb1Q91Y08 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhb1Q91Y08 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Pcdhb1Q91Y08 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhb1Q91Y08 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb1Q91Y08 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Gm27397-201ENSMUST00000184997 107 ntBASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Gm2213-201ENSMUST00000197485 688 ntBASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.89□□□□□ -0.03
Pcdhb1Q91Y08 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Gm43125-201ENSMUST00000201724 730 ntBASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Gm18049-201ENSMUST00000208909 581 ntBASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Pcdhb1Q91Y08 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms