Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Gm8749-201ENSMUST00000117737 331 ntBASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Gm7774-201ENSMUST00000200064 533 ntBASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Gm6562-201ENSMUST00000221903 464 ntBASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb20Q91XZ9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Gm5479-201ENSMUST00000160578 435 ntBASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Gm8582-201ENSMUST00000164061 789 ntBASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Gm9824-201ENSMUST00000178707 561 ntBASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Gm27430-201ENSMUST00000184585 107 ntBASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Gm8641-201ENSMUST00000186995 826 ntBASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Gm44333-201ENSMUST00000197168 107 ntBASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Gm19269-201ENSMUST00000211401 804 ntBASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 AC121986.1-201ENSMUST00000218588 781 ntBASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Gm38055-201ENSMUST00000195353 2217 ntBASIC14.09□□□□□ -0.15
Pcdhb20Q91XZ9 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb20Q91XZ9 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb20Q91XZ9 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb20Q91XZ9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb20Q91XZ9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb20Q91XZ9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb20Q91XZ9 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb20Q91XZ9 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb20Q91XZ9 Gm13616-201ENSMUST00000120600 222 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms