Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhga4Q91XY4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdhga4Q91XY4 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.16□□□□□ -0.14
Pcdhga4Q91XY4 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Pcdhga4Q91XY4 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Pcdhga4Q91XY4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhga4Q91XY4 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdhga4Q91XY4 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Pcdhga4Q91XY4 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdhga4Q91XY4 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhga4Q91XY4 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhga4Q91XY4 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Pcdhga4Q91XY4 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhga4Q91XY4 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhga4Q91XY4 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhga4Q91XY4 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhga4Q91XY4 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhga4Q91XY4 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhga4Q91XY4 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pcdhga4Q91XY4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Gm27430-201ENSMUST00000184585 107 ntBASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Gm44333-201ENSMUST00000197168 107 ntBASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pcdhga4Q91XY4 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.15□□□□□ -0.15
Pcdhga4Q91XY4 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga4Q91XY4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 Gm9824-201ENSMUST00000178707 561 ntBASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms