Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trex1Q91XB0 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.36■□□□□ 0.21
Trex1Q91XB0 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.36■□□□□ 0.21
Trex1Q91XB0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trex1Q91XB0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trex1Q91XB0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trex1Q91XB0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trex1Q91XB0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trex1Q91XB0 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trex1Q91XB0 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trex1Q91XB0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.36■□□□□ 0.21
Trex1Q91XB0 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trex1Q91XB0 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC16.36■□□□□ 0.21
Trex1Q91XB0 Gm37714-201ENSMUST00000194742 342 ntBASIC16.36■□□□□ 0.21
Trex1Q91XB0 Gm44608-201ENSMUST00000206827 855 ntBASIC16.36■□□□□ 0.21
Trex1Q91XB0 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trex1Q91XB0 Gm25857-201ENSMUST00000082788 129 ntBASIC16.36■□□□□ 0.21
Trex1Q91XB0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trex1Q91XB0 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trex1Q91XB0 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trex1Q91XB0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trex1Q91XB0 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trex1Q91XB0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trex1Q91XB0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trex1Q91XB0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trex1Q91XB0 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trex1Q91XB0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trex1Q91XB0 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trex1Q91XB0 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trex1Q91XB0 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trex1Q91XB0 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.36■□□□□ 0.21
Trex1Q91XB0 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.35■□□□□ 0.21
Trex1Q91XB0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trex1Q91XB0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.35■□□□□ 0.21
Trex1Q91XB0 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.35■□□□□ 0.21
Trex1Q91XB0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.35■□□□□ 0.21
Trex1Q91XB0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trex1Q91XB0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trex1Q91XB0 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trex1Q91XB0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trex1Q91XB0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trex1Q91XB0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trex1Q91XB0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trex1Q91XB0 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trex1Q91XB0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.34■□□□□ 0.21
Trex1Q91XB0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.34■□□□□ 0.21
Trex1Q91XB0 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.34■□□□□ 0.21
Trex1Q91XB0 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trex1Q91XB0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trex1Q91XB0 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trex1Q91XB0 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms