Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4aQ8VEJ9 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Vps4aQ8VEJ9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Gm13365-201ENSMUST00000121188 973 ntBASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Vps4aQ8VEJ9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms