Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cuedc1Q8R3V6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Gm16026-204ENSMUST00000162652 683 ntBASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Gm10499-201ENSMUST00000174094 934 ntBASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Syt7-205ENSMUST00000224135 1557 ntBASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cuedc1Q8R3V6 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Gm37057-201ENSMUST00000192624 1916 ntBASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Gm27838-201ENSMUST00000184829 128 ntBASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Gm38294-201ENSMUST00000192831 381 ntBASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cuedc1Q8R3V6 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cuedc1Q8R3V6 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cuedc1Q8R3V6 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cuedc1Q8R3V6 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cuedc1Q8R3V6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cuedc1Q8R3V6 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms