Protein–RNA interactions for Protein: Q8R2A7

Vmn1r228, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r228Q8R2A7 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
Vmn1r228Q8R2A7 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.43□□□□□ -0.42
Vmn1r228Q8R2A7 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Gm25925-201ENSMUST00000158314 306 ntBASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmn1r228Q8R2A7 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmn1r228Q8R2A7 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmn1r228Q8R2A7 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms