Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nudcd3Q8R1N4 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nudcd3Q8R1N4 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.35□□□□□ -0.11
Nudcd3Q8R1N4 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nudcd3Q8R1N4 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Olfr286-202ENSMUST00000205305 969 ntBASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nudcd3Q8R1N4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Nudcd3Q8R1N4 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nudcd3Q8R1N4 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nudcd3Q8R1N4 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Gm2451-201ENSMUST00000199447 999 ntBASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Gm10290-201ENSMUST00000200451 999 ntBASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nudcd3Q8R1N4 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms