Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rpp40Q8R1F9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rpp40Q8R1F9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rpp40Q8R1F9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Rpp40Q8R1F9 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rpp40Q8R1F9 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.33■□□□□ 0.05
Rpp40Q8R1F9 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Rpp40Q8R1F9 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rpp40Q8R1F9 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.33■□□□□ 0.04
Rpp40Q8R1F9 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp40Q8R1F9 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.33■□□□□ 0.04
Rpp40Q8R1F9 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.33■□□□□ 0.04
Rpp40Q8R1F9 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp40Q8R1F9 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp40Q8R1F9 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.33■□□□□ 0.04
Rpp40Q8R1F9 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp40Q8R1F9 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp40Q8R1F9 Gm9229-201ENSMUST00000222777 126 ntBASIC15.33■□□□□ 0.04
Rpp40Q8R1F9 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.33■□□□□ 0.04
Rpp40Q8R1F9 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.33■□□□□ 0.04
Rpp40Q8R1F9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp40Q8R1F9 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rpp40Q8R1F9 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp40Q8R1F9 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.33■□□□□ 0.04
Rpp40Q8R1F9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp40Q8R1F9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp40Q8R1F9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rpp40Q8R1F9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp40Q8R1F9 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp40Q8R1F9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpp40Q8R1F9 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Gm15487-201ENSMUST00000122373 465 ntBASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Mir8102-201ENSMUST00000184148 139 ntBASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpp40Q8R1F9 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 Gm14057-201ENSMUST00000120631 482 ntBASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 Mir7684-201ENSMUST00000183858 60 ntBASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms