Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cchcr1Q8K2I2 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cchcr1Q8K2I2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 Gm17271-201ENSMUST00000165535 355 ntBASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cchcr1Q8K2I2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cchcr1Q8K2I2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cchcr1Q8K2I2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cchcr1Q8K2I2 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.93■□□□□ 0.3
Cchcr1Q8K2I2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cchcr1Q8K2I2 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Cchcr1Q8K2I2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.93■□□□□ 0.3
Cchcr1Q8K2I2 Gm12260-201ENSMUST00000122447 411 ntBASIC16.93■□□□□ 0.3
Cchcr1Q8K2I2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cchcr1Q8K2I2 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Cchcr1Q8K2I2 Gm8584-201ENSMUST00000171982 758 ntBASIC16.93■□□□□ 0.3
Cchcr1Q8K2I2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cchcr1Q8K2I2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.93■□□□□ 0.3
Cchcr1Q8K2I2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cchcr1Q8K2I2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.93■□□□□ 0.3
Cchcr1Q8K2I2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cchcr1Q8K2I2 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cchcr1Q8K2I2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cchcr1Q8K2I2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cchcr1Q8K2I2 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.93■□□□□ 0.3
Cchcr1Q8K2I2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.93■□□□□ 0.3
Cchcr1Q8K2I2 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cchcr1Q8K2I2 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cchcr1Q8K2I2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cchcr1Q8K2I2 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.92■□□□□ 0.3
Cchcr1Q8K2I2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cchcr1Q8K2I2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cchcr1Q8K2I2 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cchcr1Q8K2I2 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cchcr1Q8K2I2 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cchcr1Q8K2I2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cchcr1Q8K2I2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cchcr1Q8K2I2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Cchcr1Q8K2I2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.92■□□□□ 0.3
Cchcr1Q8K2I2 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.92■□□□□ 0.3
Cchcr1Q8K2I2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.92■□□□□ 0.3
Cchcr1Q8K2I2 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms