Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rdh1Q8CGV4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rdh1Q8CGV4 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rdh1Q8CGV4 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rdh1Q8CGV4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rdh1Q8CGV4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh1Q8CGV4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Rdh1Q8CGV4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh1Q8CGV4 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh1Q8CGV4 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Rdh1Q8CGV4 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh1Q8CGV4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh1Q8CGV4 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Rdh1Q8CGV4 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh1Q8CGV4 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh1Q8CGV4 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh1Q8CGV4 Gm15460-201ENSMUST00000118147 391 ntBASIC13.91□□□□□ -0.18
Rdh1Q8CGV4 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.91□□□□□ -0.18
Rdh1Q8CGV4 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.91□□□□□ -0.18
Rdh1Q8CGV4 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.91□□□□□ -0.18
Rdh1Q8CGV4 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh1Q8CGV4 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh1Q8CGV4 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh1Q8CGV4 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Rdh1Q8CGV4 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh1Q8CGV4 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh1Q8CGV4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh1Q8CGV4 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Rdh1Q8CGV4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh1Q8CGV4 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh1Q8CGV4 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Gm6218-201ENSMUST00000219812 628 ntBASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh1Q8CGV4 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Rdh1Q8CGV4 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Rdh1Q8CGV4 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Gm15393-201ENSMUST00000120499 219 ntBASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Rdh1Q8CGV4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms