Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Gm27838-201ENSMUST00000184829 128 ntBASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbm28Q8CGC6 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 Gm37230-201ENSMUST00000194491 818 ntBASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 Gm7730-201ENSMUST00000212486 454 ntBASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 Dupd1-202ENSMUST00000224735 548 ntBASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rbm28Q8CGC6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Mir1897-201ENSMUST00000122581 272 ntBASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Gm27631-201ENSMUST00000184163 466 ntBASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Gm5186-201ENSMUST00000218781 920 ntBASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Gm16476-201ENSMUST00000221544 139 ntBASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rbm28Q8CGC6 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rbm28Q8CGC6 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rbm28Q8CGC6 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rbm28Q8CGC6 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.91■□□□□ 0.3
Rbm28Q8CGC6 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rbm28Q8CGC6 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.91■□□□□ 0.3
Rbm28Q8CGC6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rbm28Q8CGC6 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rbm28Q8CGC6 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rbm28Q8CGC6 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.91■□□□□ 0.3
Rbm28Q8CGC6 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rbm28Q8CGC6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rbm28Q8CGC6 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Rbm28Q8CGC6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms