Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm25255-201ENSMUST00000179579 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm24755-201ENSMUST00000179691 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm26506-201ENSMUST00000179692 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm25086-201ENSMUST00000179931 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm23243-201ENSMUST00000180047 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm24659-201ENSMUST00000180212 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm24169-201ENSMUST00000180244 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm23689-201ENSMUST00000180354 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm27359-201ENSMUST00000184153 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm27785-201ENSMUST00000184268 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm27466-201ENSMUST00000184396 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm27703-201ENSMUST00000184836 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm29541-201ENSMUST00000191351 678 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim9Q8C7M3 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trim9Q8C7M3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim9Q8C7M3 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim9Q8C7M3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim9Q8C7M3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trim9Q8C7M3 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim9Q8C7M3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim9Q8C7M3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim9Q8C7M3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim9Q8C7M3 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim9Q8C7M3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim9Q8C7M3 Gm9824-201ENSMUST00000178707 561 ntBASIC15.81■□□□□ 0.12
Trim9Q8C7M3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim9Q8C7M3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim9Q8C7M3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.81■□□□□ 0.12
Trim9Q8C7M3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim9Q8C7M3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim9Q8C7M3 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim9Q8C7M3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim9Q8C7M3 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim9Q8C7M3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim9Q8C7M3 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim9Q8C7M3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Trim9Q8C7M3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim9Q8C7M3 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim9Q8C7M3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim9Q8C7M3 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim9Q8C7M3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.8■□□□□ 0.12
Trim9Q8C7M3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim9Q8C7M3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim9Q8C7M3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim9Q8C7M3 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.8■□□□□ 0.12
Trim9Q8C7M3 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim9Q8C7M3 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim9Q8C7M3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim9Q8C7M3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim9Q8C7M3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trim9Q8C7M3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim9Q8C7M3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim9Q8C7M3 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trim9Q8C7M3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim9Q8C7M3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim9Q8C7M3 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 BC001981-202ENSMUST00000191393 1545 ntBASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Gm6222-201ENSMUST00000120787 396 ntBASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Gm8584-201ENSMUST00000171982 758 ntBASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Gm27702-201ENSMUST00000184512 56 ntBASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms