Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Gm19164-201ENSMUST00000210667 640 ntBASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Gm7461-201ENSMUST00000058918 827 ntBASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tsen54Q8C2A2 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Tsen54Q8C2A2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Gm7862-201ENSMUST00000121461 292 ntBASIC12□□□□□ -0.49
Tsen54Q8C2A2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 AC154757.1-201ENSMUST00000228289 336 ntBASIC12□□□□□ -0.49
Tsen54Q8C2A2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms