Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf3Q8C120 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Sh3rf3Q8C120 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sh3rf3Q8C120 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sh3rf3Q8C120 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sh3rf3Q8C120 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sh3rf3Q8C120 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sh3rf3Q8C120 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sh3rf3Q8C120 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.95□□□□□ -0.02
Sh3rf3Q8C120 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sh3rf3Q8C120 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sh3rf3Q8C120 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sh3rf3Q8C120 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sh3rf3Q8C120 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sh3rf3Q8C120 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Sh3rf3Q8C120 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Sh3rf3Q8C120 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sh3rf3Q8C120 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.95□□□□□ -0.02
Sh3rf3Q8C120 Gm2810-201ENSMUST00000118681 990 ntBASIC14.95□□□□□ -0.02
Sh3rf3Q8C120 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.95□□□□□ -0.02
Sh3rf3Q8C120 Gm24513-201ENSMUST00000174964 138 ntBASIC14.95□□□□□ -0.02
Sh3rf3Q8C120 Gm27397-201ENSMUST00000184997 107 ntBASIC14.95□□□□□ -0.02
Sh3rf3Q8C120 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.95□□□□□ -0.02
Sh3rf3Q8C120 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sh3rf3Q8C120 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.95□□□□□ -0.02
Sh3rf3Q8C120 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.95□□□□□ -0.02
Sh3rf3Q8C120 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sh3rf3Q8C120 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sh3rf3Q8C120 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sh3rf3Q8C120 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sh3rf3Q8C120 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sh3rf3Q8C120 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf3Q8C120 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Mir1895-201ENSMUST00000122615 79 ntBASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Gm25925-201ENSMUST00000158314 306 ntBASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Gm44335-201ENSMUST00000196879 141 ntBASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Gm44297-201ENSMUST00000198304 141 ntBASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Gm44346-201ENSMUST00000198851 141 ntBASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf3Q8C120 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms