Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Gm12882-201ENSMUST00000121696 517 ntBASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Gm27397-201ENSMUST00000184997 107 ntBASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Gm44335-201ENSMUST00000196879 141 ntBASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Gm44297-201ENSMUST00000198304 141 ntBASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Gm44346-201ENSMUST00000198851 141 ntBASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Gm43125-201ENSMUST00000201724 730 ntBASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trub1Q8C0D0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trub1Q8C0D0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Trub1Q8C0D0 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.78□□□□□ -0.04
Trub1Q8C0D0 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trub1Q8C0D0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trub1Q8C0D0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trub1Q8C0D0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Trub1Q8C0D0 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trub1Q8C0D0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trub1Q8C0D0 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trub1Q8C0D0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.78□□□□□ -0.04
Trub1Q8C0D0 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.78□□□□□ -0.04
Trub1Q8C0D0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trub1Q8C0D0 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trub1Q8C0D0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trub1Q8C0D0 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trub1Q8C0D0 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trub1Q8C0D0 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trub1Q8C0D0 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trub1Q8C0D0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trub1Q8C0D0 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trub1Q8C0D0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trub1Q8C0D0 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.78□□□□□ -0.04
Trub1Q8C0D0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trub1Q8C0D0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trub1Q8C0D0 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trub1Q8C0D0 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trub1Q8C0D0 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trub1Q8C0D0 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trub1Q8C0D0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trub1Q8C0D0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
Trub1Q8C0D0 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trub1Q8C0D0 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trub1Q8C0D0 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trub1Q8C0D0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trub1Q8C0D0 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trub1Q8C0D0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
Trub1Q8C0D0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trub1Q8C0D0 Gm25287-201ENSMUST00000103846 110 ntBASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Gm22918-201ENSMUST00000103855 110 ntBASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trub1Q8C0D0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms