Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Gm46209-201ENSMUST00000217912 553 ntBASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Gm7775-201ENSMUST00000218871 853 ntBASIC14.67□□□□□ -0.06
Nup54Q8BTS4 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.67□□□□□ -0.06
Nup54Q8BTS4 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.66□□□□□ -0.06
Nup54Q8BTS4 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nup54Q8BTS4 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.66□□□□□ -0.06
Nup54Q8BTS4 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup54Q8BTS4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nup54Q8BTS4 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nup54Q8BTS4 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup54Q8BTS4 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Nup54Q8BTS4 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nup54Q8BTS4 Gm27989-201ENSMUST00000184721 107 ntBASIC14.66□□□□□ -0.06
Nup54Q8BTS4 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nup54Q8BTS4 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup54Q8BTS4 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup54Q8BTS4 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup54Q8BTS4 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup54Q8BTS4 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup54Q8BTS4 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup54Q8BTS4 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup54Q8BTS4 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Nup54Q8BTS4 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup54Q8BTS4 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup54Q8BTS4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Nup54Q8BTS4 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nup54Q8BTS4 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup54Q8BTS4 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.66□□□□□ -0.06
Nup54Q8BTS4 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nup54Q8BTS4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Nup54Q8BTS4 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup54Q8BTS4 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.64□□□□□ -0.07
Nup54Q8BTS4 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup54Q8BTS4 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.64□□□□□ -0.07
Nup54Q8BTS4 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup54Q8BTS4 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup54Q8BTS4 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nup54Q8BTS4 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup54Q8BTS4 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Nup54Q8BTS4 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup54Q8BTS4 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nup54Q8BTS4 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Nup54Q8BTS4 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.64□□□□□ -0.07
Nup54Q8BTS4 Gm12151-201ENSMUST00000121374 290 ntBASIC14.64□□□□□ -0.07
Nup54Q8BTS4 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Nup54Q8BTS4 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Nup54Q8BTS4 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms