Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Gm16026-204ENSMUST00000162652 683 ntBASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Gm5177-201ENSMUST00000183092 997 ntBASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne3Q8BT60 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cpne3Q8BT60 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.87□□□□□ -0.19
Cpne3Q8BT60 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.87□□□□□ -0.19
Cpne3Q8BT60 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne3Q8BT60 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne3Q8BT60 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne3Q8BT60 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cpne3Q8BT60 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne3Q8BT60 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne3Q8BT60 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne3Q8BT60 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne3Q8BT60 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne3Q8BT60 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.87□□□□□ -0.19
Cpne3Q8BT60 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.87□□□□□ -0.19
Cpne3Q8BT60 Gm27301-201ENSMUST00000184012 127 ntBASIC13.87□□□□□ -0.19
Cpne3Q8BT60 Gm27741-201ENSMUST00000185060 237 ntBASIC13.87□□□□□ -0.19
Cpne3Q8BT60 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne3Q8BT60 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne3Q8BT60 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne3Q8BT60 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
Cpne3Q8BT60 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne3Q8BT60 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.87□□□□□ -0.19
Cpne3Q8BT60 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne3Q8BT60 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne3Q8BT60 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne3Q8BT60 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne3Q8BT60 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne3Q8BT60 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Cpne3Q8BT60 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne3Q8BT60 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne3Q8BT60 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne3Q8BT60 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne3Q8BT60 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne3Q8BT60 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne3Q8BT60 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne3Q8BT60 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne3Q8BT60 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.86□□□□□ -0.19
Cpne3Q8BT60 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne3Q8BT60 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Cpne3Q8BT60 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne3Q8BT60 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne3Q8BT60 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.86□□□□□ -0.19
Cpne3Q8BT60 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.86□□□□□ -0.19
Cpne3Q8BT60 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.86□□□□□ -0.19
Cpne3Q8BT60 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne3Q8BT60 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Cpne3Q8BT60 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne3Q8BT60 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne3Q8BT60 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne3Q8BT60 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne3Q8BT60 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Cpne3Q8BT60 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne3Q8BT60 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cpne3Q8BT60 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpne3Q8BT60 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpne3Q8BT60 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpne3Q8BT60 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.85□□□□□ -0.19
Cpne3Q8BT60 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Cpne3Q8BT60 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.85□□□□□ -0.19
Cpne3Q8BT60 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpne3Q8BT60 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.85□□□□□ -0.19
Cpne3Q8BT60 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cpne3Q8BT60 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.85□□□□□ -0.19
Cpne3Q8BT60 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpne3Q8BT60 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpne3Q8BT60 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.85□□□□□ -0.19
Cpne3Q8BT60 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.85□□□□□ -0.19
Cpne3Q8BT60 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.85□□□□□ -0.19
Cpne3Q8BT60 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpne3Q8BT60 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.85□□□□□ -0.19
Cpne3Q8BT60 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpne3Q8BT60 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpne3Q8BT60 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpne3Q8BT60 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms