Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Gm12585-201ENSMUST00000117307 290 ntBASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Mir6392-201ENSMUST00000184924 108 ntBASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.18■□□□□ 0.02
Rd3Q8BRE0 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rd3Q8BRE0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Gm43433-201ENSMUST00000196573 481 ntBASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Gm45668-201ENSMUST00000211271 493 ntBASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rd3Q8BRE0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Gm10275-202ENSMUST00000168697 495 ntBASIC15.16■□□□□ 0.02
Rd3Q8BRE0 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Gm10275-201ENSMUST00000092620 635 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms