Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Mir1895-201ENSMUST00000122615 79 ntBASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Gm16026-204ENSMUST00000162652 683 ntBASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Gm44335-201ENSMUST00000196879 141 ntBASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Gm44297-201ENSMUST00000198304 141 ntBASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Gm44346-201ENSMUST00000198851 141 ntBASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4Q8BQZ5 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms