Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.63□□□□□ -0.07
Sfr1Q8BP27 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sfr1Q8BP27 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sfr1Q8BP27 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.63□□□□□ -0.07
Sfr1Q8BP27 Gm7774-201ENSMUST00000200064 533 ntBASIC14.63□□□□□ -0.07
Sfr1Q8BP27 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.63□□□□□ -0.07
Sfr1Q8BP27 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sfr1Q8BP27 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sfr1Q8BP27 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sfr1Q8BP27 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.63□□□□□ -0.07
Sfr1Q8BP27 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sfr1Q8BP27 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Sfr1Q8BP27 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sfr1Q8BP27 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.63□□□□□ -0.07
Sfr1Q8BP27 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sfr1Q8BP27 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Sfr1Q8BP27 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sfr1Q8BP27 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sfr1Q8BP27 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sfr1Q8BP27 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sfr1Q8BP27 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Gm37230-201ENSMUST00000194491 818 ntBASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Sfr1Q8BP27 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sfr1Q8BP27 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sfr1Q8BP27 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sfr1Q8BP27 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.61□□□□□ -0.07
Sfr1Q8BP27 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sfr1Q8BP27 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sfr1Q8BP27 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sfr1Q8BP27 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sfr1Q8BP27 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sfr1Q8BP27 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sfr1Q8BP27 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sfr1Q8BP27 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sfr1Q8BP27 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.61□□□□□ -0.07
Sfr1Q8BP27 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sfr1Q8BP27 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sfr1Q8BP27 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sfr1Q8BP27 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sfr1Q8BP27 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sfr1Q8BP27 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Sfr1Q8BP27 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Sfr1Q8BP27 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sfr1Q8BP27 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sfr1Q8BP27 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sfr1Q8BP27 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sfr1Q8BP27 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sfr1Q8BP27 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sfr1Q8BP27 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sfr1Q8BP27 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sfr1Q8BP27 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sfr1Q8BP27 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sfr1Q8BP27 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sfr1Q8BP27 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sfr1Q8BP27 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sfr1Q8BP27 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sfr1Q8BP27 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.6□□□□□ -0.07
Sfr1Q8BP27 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sfr1Q8BP27 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sfr1Q8BP27 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sfr1Q8BP27 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.6□□□□□ -0.07
Sfr1Q8BP27 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sfr1Q8BP27 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sfr1Q8BP27 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms