Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm18934-201ENSMUST00000216671 1044 ntBASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Gm44645-201ENSMUST00000205492 1653 ntBASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Gm4271-201ENSMUST00000174444 973 ntBASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Gm27243-201ENSMUST00000183964 521 ntBASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Gm45880-201ENSMUST00000213041 853 ntBASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Gm12203-201ENSMUST00000118235 598 ntBASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Gm12209-201ENSMUST00000120089 596 ntBASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Gm9124-201ENSMUST00000191789 1092 ntBASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Gm9113-201ENSMUST00000192510 1018 ntBASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Gm4857-201ENSMUST00000192718 785 ntBASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Gm9131-201ENSMUST00000193557 1089 ntBASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Gm9121-201ENSMUST00000193749 1071 ntBASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 AC073947.2-201ENSMUST00000215888 1130 ntBASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Gm17823-201ENSMUST00000217830 1006 ntBASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 AC133598.1-201ENSMUST00000224327 660 ntBASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col16a1Q8BLX7 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC18.46■□□□□ 0.55
Col16a1Q8BLX7 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col16a1Q8BLX7 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col16a1Q8BLX7 Gm10339-203ENSMUST00000225409 1671 ntBASIC18.46■□□□□ 0.55
Col16a1Q8BLX7 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col16a1Q8BLX7 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col16a1Q8BLX7 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col16a1Q8BLX7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col16a1Q8BLX7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Col16a1Q8BLX7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col16a1Q8BLX7 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col16a1Q8BLX7 Gm27501-201ENSMUST00000183599 107 ntBASIC18.46■□□□□ 0.55
Col16a1Q8BLX7 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC18.46■□□□□ 0.55
Col16a1Q8BLX7 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col16a1Q8BLX7 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC18.46■□□□□ 0.55
Col16a1Q8BLX7 Gm3961-201ENSMUST00000204425 994 ntBASIC18.46■□□□□ 0.55
Col16a1Q8BLX7 Gm18056-201ENSMUST00000207670 568 ntBASIC18.46■□□□□ 0.55
Col16a1Q8BLX7 Gm18061-201ENSMUST00000208350 562 ntBASIC18.46■□□□□ 0.55
Col16a1Q8BLX7 Gm18063-201ENSMUST00000208529 568 ntBASIC18.46■□□□□ 0.55
Col16a1Q8BLX7 Gm18052-201ENSMUST00000208750 559 ntBASIC18.46■□□□□ 0.55
Col16a1Q8BLX7 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col16a1Q8BLX7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Col16a1Q8BLX7 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Col16a1Q8BLX7 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col16a1Q8BLX7 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC18.45■□□□□ 0.54
Col16a1Q8BLX7 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col16a1Q8BLX7 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Col16a1Q8BLX7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col16a1Q8BLX7 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col16a1Q8BLX7 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col16a1Q8BLX7 Gm5687-201ENSMUST00000118252 640 ntBASIC18.45■□□□□ 0.54
Col16a1Q8BLX7 Gm27516-201ENSMUST00000184237 98 ntBASIC18.45■□□□□ 0.54
Col16a1Q8BLX7 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col16a1Q8BLX7 AC159747.1-201ENSMUST00000219903 265 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms