Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Gm45747-201ENSMUST00000212203 999 ntBASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc40Q8BI79 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Gm12260-201ENSMUST00000122447 411 ntBASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Gm17968-201ENSMUST00000194902 784 ntBASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc40Q8BI79 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Gm2451-201ENSMUST00000199447 999 ntBASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Gm10290-201ENSMUST00000200451 999 ntBASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ccdc40Q8BI79 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc40Q8BI79 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc40Q8BI79 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Ccdc40Q8BI79 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms