Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Gm15427-201ENSMUST00000117288 531 ntBASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Rpph1-201ENSMUST00000175096 319 ntBASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Gm27920-201ENSMUST00000183953 96 ntBASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Mir8117-201ENSMUST00000184773 107 ntBASIC15.33■□□□□ 0.04
Nucks1Q80XU3 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Gm12260-201ENSMUST00000122447 411 ntBASIC15.32■□□□□ 0.04
Nucks1Q80XU3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nucks1Q80XU3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.31■□□□□ 0.04
Nucks1Q80XU3 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.31■□□□□ 0.04
Nucks1Q80XU3 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nucks1Q80XU3 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nucks1Q80XU3 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nucks1Q80XU3 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nucks1Q80XU3 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nucks1Q80XU3 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nucks1Q80XU3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.3■□□□□ 0.04
Nucks1Q80XU3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nucks1Q80XU3 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms