Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Gm23984-201ENSMUST00000157139 203 ntBASIC13.25□□□□□ -0.29
Pif1Q80SX8 Gm18187-201ENSMUST00000196476 984 ntBASIC13.25□□□□□ -0.29
Pif1Q80SX8 Gm6745-201ENSMUST00000199216 526 ntBASIC13.25□□□□□ -0.29
Pif1Q80SX8 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Gm45453-201ENSMUST00000211758 853 ntBASIC13.25□□□□□ -0.29
Pif1Q80SX8 Gm9182-201ENSMUST00000217829 639 ntBASIC13.25□□□□□ -0.29
Pif1Q80SX8 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.25□□□□□ -0.29
Pif1Q80SX8 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.25□□□□□ -0.29
Pif1Q80SX8 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pif1Q80SX8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.24□□□□□ -0.29
Pif1Q80SX8 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pif1Q80SX8 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pif1Q80SX8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Gm8749-201ENSMUST00000117737 331 ntBASIC13.24□□□□□ -0.29
Pif1Q80SX8 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Gm9522-201ENSMUST00000182394 926 ntBASIC13.24□□□□□ -0.29
Pif1Q80SX8 Gm42612-201ENSMUST00000197986 623 ntBASIC13.24□□□□□ -0.29
Pif1Q80SX8 Gm43170-201ENSMUST00000199827 612 ntBASIC13.24□□□□□ -0.29
Pif1Q80SX8 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.24□□□□□ -0.29
Pif1Q80SX8 AC153961.1-201ENSMUST00000217760 385 ntBASIC13.24□□□□□ -0.29
Pif1Q80SX8 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pif1Q80SX8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pif1Q80SX8 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Gm8515-201ENSMUST00000194852 576 ntBASIC13.23□□□□□ -0.29
Pif1Q80SX8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.23□□□□□ -0.29
Pif1Q80SX8 Gm9229-201ENSMUST00000222777 126 ntBASIC13.23□□□□□ -0.29
Pif1Q80SX8 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pif1Q80SX8 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pif1Q80SX8 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms