Protein–RNA interactions for Protein: Q7TNM2

Trim46, Tripartite motif-containing protein 46, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim46Q7TNM2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim46Q7TNM2 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim46Q7TNM2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim46Q7TNM2 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim46Q7TNM2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim46Q7TNM2 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim46Q7TNM2 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim46Q7TNM2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim46Q7TNM2 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim46Q7TNM2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim46Q7TNM2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim46Q7TNM2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim46Q7TNM2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim46Q7TNM2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim46Q7TNM2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.47□□□□□ -0.25
Trim46Q7TNM2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim46Q7TNM2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim46Q7TNM2 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim46Q7TNM2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.46□□□□□ -0.25
Trim46Q7TNM2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim46Q7TNM2 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim46Q7TNM2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim46Q7TNM2 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.46□□□□□ -0.25
Trim46Q7TNM2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim46Q7TNM2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim46Q7TNM2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim46Q7TNM2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim46Q7TNM2 Gm4995-201ENSMUST00000117247 432 ntBASIC13.46□□□□□ -0.25
Trim46Q7TNM2 Gm11745-201ENSMUST00000121669 448 ntBASIC13.46□□□□□ -0.25
Trim46Q7TNM2 Mir1895-201ENSMUST00000122615 79 ntBASIC13.46□□□□□ -0.25
Trim46Q7TNM2 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim46Q7TNM2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim46Q7TNM2 Gm38225-201ENSMUST00000194001 393 ntBASIC13.46□□□□□ -0.25
Trim46Q7TNM2 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim46Q7TNM2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.46□□□□□ -0.25
Trim46Q7TNM2 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Trim46Q7TNM2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim46Q7TNM2 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim46Q7TNM2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim46Q7TNM2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Trim46Q7TNM2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim46Q7TNM2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Trim46Q7TNM2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.46□□□□□ -0.26
Trim46Q7TNM2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim46Q7TNM2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Trim46Q7TNM2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim46Q7TNM2 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.46□□□□□ -0.26
Trim46Q7TNM2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.26
Trim46Q7TNM2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim46Q7TNM2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim46Q7TNM2 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim46Q7TNM2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.26
Trim46Q7TNM2 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim46Q7TNM2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.46□□□□□ -0.26
Trim46Q7TNM2 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim46Q7TNM2 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim46Q7TNM2 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim46Q7TNM2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.45□□□□□ -0.26
Trim46Q7TNM2 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim46Q7TNM2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trim46Q7TNM2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim46Q7TNM2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.45□□□□□ -0.26
Trim46Q7TNM2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.45□□□□□ -0.26
Trim46Q7TNM2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim46Q7TNM2 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.45□□□□□ -0.26
Trim46Q7TNM2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Trim46Q7TNM2 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim46Q7TNM2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim46Q7TNM2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trim46Q7TNM2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim46Q7TNM2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Trim46Q7TNM2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Trim46Q7TNM2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim46Q7TNM2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim46Q7TNM2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
Trim46Q7TNM2 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim46Q7TNM2 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim46Q7TNM2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim46Q7TNM2 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.45□□□□□ -0.26
Trim46Q7TNM2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim46Q7TNM2 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Gm6754-201ENSMUST00000117124 913 ntBASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms