Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Mup-ps23-201ENSMUST00000118063 630 ntBASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Gm24644-201ENSMUST00000157114 139 ntBASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Gm7287-201ENSMUST00000205267 602 ntBASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 AC122459.1-201ENSMUST00000228373 885 ntBASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup98Q6PFD9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup98Q6PFD9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Nup98Q6PFD9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup98Q6PFD9 Gm23931-201ENSMUST00000103842 109 ntBASIC16.62■□□□□ 0.25
Nup98Q6PFD9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Nup98Q6PFD9 Gm12928-201ENSMUST00000117115 573 ntBASIC16.62■□□□□ 0.25
Nup98Q6PFD9 Gm13612-201ENSMUST00000119276 390 ntBASIC16.62■□□□□ 0.25
Nup98Q6PFD9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Nup98Q6PFD9 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nup98Q6PFD9 Snora78-201ENSMUST00000158630 128 ntBASIC16.62■□□□□ 0.25
Nup98Q6PFD9 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.62■□□□□ 0.25
Nup98Q6PFD9 Gm44799-201ENSMUST00000207639 1202 ntBASIC16.62■□□□□ 0.25
Nup98Q6PFD9 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC16.62■□□□□ 0.25
Nup98Q6PFD9 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup98Q6PFD9 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup98Q6PFD9 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup98Q6PFD9 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup98Q6PFD9 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.62■□□□□ 0.25
Nup98Q6PFD9 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup98Q6PFD9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup98Q6PFD9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Nup98Q6PFD9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Nup98Q6PFD9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nup98Q6PFD9 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Gm15824-201ENSMUST00000119516 955 ntBASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Gm14660-201ENSMUST00000119809 575 ntBASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup98Q6PFD9 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Gm8652-201ENSMUST00000181363 964 ntBASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms