Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm12020-201ENSMUST00000119030 2042 ntBASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Gm11960-202ENSMUST00000181063 2858 ntBASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Gm8810-201ENSMUST00000172895 754 ntBASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Gm9728-201ENSMUST00000200197 1055 ntBASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd4Q6PDQ2 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd4Q6PDQ2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Chd4Q6PDQ2 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Chd4Q6PDQ2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.38■□□□□ 0.53
Chd4Q6PDQ2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd4Q6PDQ2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd4Q6PDQ2 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Chd4Q6PDQ2 Gm10040-201ENSMUST00000080726 1662 ntBASIC18.38■□□□□ 0.53
Chd4Q6PDQ2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd4Q6PDQ2 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd4Q6PDQ2 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd4Q6PDQ2 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
Chd4Q6PDQ2 Gm43118-201ENSMUST00000199149 775 ntBASIC18.38■□□□□ 0.53
Chd4Q6PDQ2 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC18.38■□□□□ 0.53
Chd4Q6PDQ2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd4Q6PDQ2 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chd4Q6PDQ2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd4Q6PDQ2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chd4Q6PDQ2 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Chd4Q6PDQ2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chd4Q6PDQ2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Chd4Q6PDQ2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC18.38■□□□□ 0.53
Chd4Q6PDQ2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd4Q6PDQ2 Gm13050-201ENSMUST00000122149 1345 ntBASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 Gm8584-201ENSMUST00000171982 758 ntBASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 AC131690.1-201ENSMUST00000218406 374 ntBASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 Gm37305-201ENSMUST00000195714 4279 ntBASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 Gm27514-201ENSMUST00000183692 110 ntBASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd4Q6PDQ2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 Gm27486-201ENSMUST00000184923 80 ntBASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 Gm38223-201ENSMUST00000194484 695 ntBASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 Gm8399-201ENSMUST00000082300 1117 ntBASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms